[INFO] fetching crate openmm-sys 7.4.1...
[INFO] testing openmm-sys-7.4.1 against master#1f7f8ea0721a3b1eb73e6c6d25cccb371434b320 for pr-154065-1
[INFO] extracting crate openmm-sys 7.4.1 into /workspace/builds/worker-2-tc1/source
[INFO] started tweaking crates.io crate openmm-sys 7.4.1
[INFO] finished tweaking crates.io crate openmm-sys 7.4.1
[INFO] tweaked toml for crates.io crate openmm-sys 7.4.1 written to /workspace/builds/worker-2-tc1/source/Cargo.toml
[INFO] validating manifest of crates.io crate openmm-sys 7.4.1 on toolchain 1f7f8ea0721a3b1eb73e6c6d25cccb371434b320
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1f7f8ea0721a3b1eb73e6c6d25cccb371434b320" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate crates.io crate openmm-sys 7.4.1 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1f7f8ea0721a3b1eb73e6c6d25cccb371434b320" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded cmake v0.1.44
[INFO] [stderr]   Downloaded cc v1.0.59
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+1f7f8ea0721a3b1eb73e6c6d25cccb371434b320" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] b9a99e158fd6a82264636d3fed9294611e948eeaf1a6c205703ea2788d930325
[INFO] running `Command { std: "docker" "start" "-a" "b9a99e158fd6a82264636d3fed9294611e948eeaf1a6c205703ea2788d930325", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "b9a99e158fd6a82264636d3fed9294611e948eeaf1a6c205703ea2788d930325", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "b9a99e158fd6a82264636d3fed9294611e948eeaf1a6c205703ea2788d930325", kill_on_drop: false }`
[INFO] [stdout] b9a99e158fd6a82264636d3fed9294611e948eeaf1a6c205703ea2788d930325
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+1f7f8ea0721a3b1eb73e6c6d25cccb371434b320" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] fb408a450f4040c1d130cb7292a40586311e8a19857d63abc819a7cbc134b963
[INFO] running `Command { std: "docker" "start" "-a" "fb408a450f4040c1d130cb7292a40586311e8a19857d63abc819a7cbc134b963", kill_on_drop: false }`
[INFO] [stderr]    Compiling cc v1.0.59
[INFO] [stderr]    Compiling cmake v0.1.44
[INFO] [stderr]    Compiling openmm-sys v7.4.1 (/opt/rustwide/workdir)
[INFO] [stderr] warning: openmm-sys@7.4.1: [OpenMM-sys] Dynamically linking against the OpenMM library.
[INFO] [stderr] error: failed to run custom build command for `openmm-sys v7.4.1 (/opt/rustwide/workdir)`
[INFO] [stderr] note: To improve backtraces for build dependencies, set the CARGO_PROFILE_DEV_BUILD_OVERRIDE_DEBUG=true environment variable to enable debug information generation.
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `/opt/rustwide/target/debug/build/openmm-sys-2282a10b8192d896/build-script-build` (exit status: 101)
[INFO] [stderr]   --- stdout
[INFO] [stderr]   cargo:warning=[OpenMM-sys] Dynamically linking against the OpenMM library.
[INFO] [stderr]   running: cd "/opt/rustwide/target/debug/build/openmm-sys-d5861b14c2df3772/out/build" && CMAKE_PREFIX_PATH="" "cmake" "/opt/rustwide/workdir/openmm" "-DOPENMM_BUILD_PYTHON_WRAPPERS=OFF" "-DCMAKE_INSTALL_PREFIX=/opt/rustwide/target/debug/build/openmm-sys-d5861b14c2df3772/out" "-DCMAKE_C_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_C_COMPILER=/usr/bin/cc" "-DCMAKE_CXX_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_CXX_COMPILER=/usr/bin/c++" "-DCMAKE_ASM_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_ASM_COMPILER=/usr/bin/cc" "-DCMAKE_BUILD_TYPE=Release"
[INFO] [stderr]   -- Found PythonInterp: /usr/bin/python3 (found version "3.12.3") 
[INFO] [stderr]   -- The C compiler identification is GNU 13.3.0
[INFO] [stderr]   -- The CXX compiler identification is GNU 13.3.0
[INFO] [stderr]   -- Detecting C compiler ABI info
[INFO] [stderr]   -- Detecting C compiler ABI info - done
[INFO] [stderr]   -- Check for working C compiler: /usr/bin/cc - skipped
[INFO] [stderr]   -- Detecting C compile features
[INFO] [stderr]   -- Detecting C compile features - done
[INFO] [stderr]   -- Detecting CXX compiler ABI info
[INFO] [stderr]   -- Detecting CXX compiler ABI info - done
[INFO] [stderr]   -- Check for working CXX compiler: /usr/bin/c++ - skipped
[INFO] [stderr]   -- Detecting CXX compile features
[INFO] [stderr]   -- Detecting CXX compile features - done
[INFO] [stderr]   -- Configuring incomplete, errors occurred!
[INFO] [stderr] 
[INFO] [stderr]   --- stderr
[INFO] [stderr]   fatal: not a git repository (or any parent up to mount point /opt/rustwide)
[INFO] [stderr]   Stopping at filesystem boundary (GIT_DISCOVERY_ACROSS_FILESYSTEM not set).
[INFO] [stderr]   CMake Warning (dev) at CMakeLists.txt:15 (find_package):
[INFO] [stderr]     Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
[INFO] [stderr]     are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
[INFO] [stderr]     the cmake_policy command to set the policy and suppress this warning.
[INFO] [stderr] 
[INFO] [stderr]   This warning is for project developers.  Use -Wno-dev to suppress it.
[INFO] [stderr] 
[INFO] [stderr]   CMake Warning (dev) at CMakeLists.txt:21 (PROJECT):
[INFO] [stderr]     cmake_minimum_required() should be called prior to this top-level project()
[INFO] [stderr]     call.  Please see the cmake-commands(7) manual for usage documentation of
[INFO] [stderr]     both commands.
[INFO] [stderr]   This warning is for project developers.  Use -Wno-dev to suppress it.
[INFO] [stderr] 
[INFO] [stderr]   CMake Deprecation Warning at CMakeLists.txt:24 (CMAKE_MINIMUM_REQUIRED):
[INFO] [stderr]     Compatibility with CMake < 3.5 will be removed from a future version of
[INFO] [stderr]     CMake.
[INFO] [stderr] 
[INFO] [stderr]     Update the VERSION argument <min> value or use a ...<max> suffix to tell
[INFO] [stderr]     CMake that the project does not need compatibility with older versions.
[INFO] [stderr] 
[INFO] [stderr] 
[INFO] [stderr]   CMake Deprecation Warning at CMakeLists.txt:25 (CMAKE_POLICY):
[INFO] [stderr]     The OLD behavior for policy CMP0042 will be removed from a future version
[INFO] [stderr]     of CMake.
[INFO] [stderr] 
[INFO] [stderr]     The cmake-policies(7) manual explains that the OLD behaviors of all
[INFO] [stderr]     policies are deprecated and that a policy should be set to OLD only under
[INFO] [stderr]     specific short-term circumstances.  Projects should be ported to the NEW
[INFO] [stderr]     behavior and not rely on setting a policy to OLD.
[INFO] [stderr] 
[INFO] [stderr] 
[INFO] [stderr]   CMake Warning (dev) at CMakeLists.txt:30 (INCLUDE):
[INFO] [stderr]     Policy CMP0145 is not set: The Dart and FindDart modules are removed.  Run
[INFO] [stderr]     "cmake --help-policy CMP0145" for policy details.  Use the cmake_policy
[INFO] [stderr]     command to set the policy and suppress this warning.
[INFO] [stderr] 
[INFO] [stderr]   This warning is for project developers.  Use -Wno-dev to suppress it.
[INFO] [stderr] 
[INFO] [stderr]   CMake Warning (dev) at /usr/share/cmake-3.28/Modules/Dart.cmake:47 (message):
[INFO] [stderr]     Policy CMP0145 is not set: The Dart and FindDart modules are removed.  Run
[INFO] [stderr]     "cmake --help-policy CMP0145" for policy details.  Use the cmake_policy
[INFO] [stderr]     command to set the policy and suppress this warning.
[INFO] [stderr]   Call Stack (most recent call first):
[INFO] [stderr]     CMakeLists.txt:30 (INCLUDE)
[INFO] [stderr]   This warning is for project developers.  Use -Wno-dev to suppress it.
[INFO] [stderr] 
[INFO] [stderr]   CMake Error at /usr/share/cmake-3.28/Modules/FindPackageHandleStandardArgs.cmake:230 (message):
[INFO] [stderr]     Could NOT find Doxygen (missing: DOXYGEN_EXECUTABLE)
[INFO] [stderr]   Call Stack (most recent call first):
[INFO] [stderr]     /usr/share/cmake-3.28/Modules/FindPackageHandleStandardArgs.cmake:600 (_FPHSA_FAILURE_MESSAGE)
[INFO] [stderr]     /usr/share/cmake-3.28/Modules/FindDoxygen.cmake:681 (find_package_handle_standard_args)
[INFO] [stderr]     wrappers/CMakeLists.txt:1 (find_package)
[INFO] [stderr] 
[INFO] [stderr] 
[INFO] [stderr] 
[INFO] [stderr]   thread 'main' (71) panicked at /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/cmake-0.1.44/src/lib.rs:885:5:
[INFO] [stderr] 
[INFO] [stderr]   command did not execute successfully, got: exit status: 1
[INFO] [stderr] 
[INFO] [stderr]   build script failed, must exit now
[INFO] [stderr]   stack backtrace:
[INFO] [stderr]      0:     0x5ab5801e4a6a - <<std[f92b4c606f291077]::sys::backtrace::BacktraceLock>::print::DisplayBacktrace as core[786f478f706679df]::fmt::Display>::fmt
[INFO] [stderr]      1:     0x5ab5801f8ada - core[786f478f706679df]::fmt::write
[INFO] [stderr]      2:     0x5ab5801eaae2 - <std[f92b4c606f291077]::sys::stdio::unix::Stderr as std[f92b4c606f291077]::io::Write>::write_fmt
[INFO] [stderr]      3:     0x5ab5801c5eff - std[f92b4c606f291077]::panicking::default_hook::{closure#0}
[INFO] [stderr]      4:     0x5ab5801dead1 - std[f92b4c606f291077]::panicking::default_hook
[INFO] [stderr]      5:     0x5ab5801dec8b - std[f92b4c606f291077]::panicking::panic_with_hook
[INFO] [stderr]      6:     0x5ab5801c5fb8 - std[f92b4c606f291077]::panicking::panic_handler::{closure#0}
[INFO] [stderr]      7:     0x5ab5801bd819 - std[f92b4c606f291077]::sys::backtrace::__rust_end_short_backtrace::<std[f92b4c606f291077]::panicking::panic_handler::{closure#0}, !>
[INFO] [stderr]      8:     0x5ab5801c691d - __rustc[8241495c18a89d70]::rust_begin_unwind
[INFO] [stderr]      9:     0x5ab5801f91cc - core[786f478f706679df]::panicking::panic_fmt
[INFO] [stderr]     10:     0x5ab580175987 - cmake[ad747efcc1a78331]::fail
[INFO] [stderr]     11:     0x5ab580175641 - cmake[ad747efcc1a78331]::run
[INFO] [stderr]     12:     0x5ab5801790c2 - <cmake[ad747efcc1a78331]::Config>::build
[INFO] [stderr]     13:     0x5ab5801712bd - build_script_build[7673ae2aa887a67]::main
[INFO] [stderr]     14:     0x5ab580172c33 - <fn() as core[786f478f706679df]::ops::function::FnOnce<()>>::call_once
[INFO] [stderr]     15:     0x5ab58016e606 - std[f92b4c606f291077]::sys::backtrace::__rust_begin_short_backtrace::<fn(), ()>
[INFO] [stderr]     16:     0x5ab58016e619 - std[f92b4c606f291077]::rt::lang_start::<()>::{closure#0}
[INFO] [stderr]     17:     0x5ab5801ddbc4 - std[f92b4c606f291077]::rt::lang_start_internal
[INFO] [stderr]     18:     0x5ab58016e5f1 - std[f92b4c606f291077]::rt::lang_start::<()>
[INFO] [stderr]     19:     0x5ab580172c95 - main
[INFO] [stderr]     20:     0x7970198c41ca - <unknown>
[INFO] [stderr]     21:     0x7970198c428b - __libc_start_main
[INFO] [stderr]     22:     0x5ab58016d505 - _start
[INFO] [stderr]     23:                0x0 - <unknown>
[INFO] running `Command { std: "docker" "inspect" "fb408a450f4040c1d130cb7292a40586311e8a19857d63abc819a7cbc134b963", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "fb408a450f4040c1d130cb7292a40586311e8a19857d63abc819a7cbc134b963", kill_on_drop: false }`
[INFO] [stdout] fb408a450f4040c1d130cb7292a40586311e8a19857d63abc819a7cbc134b963
